T-DNA Browser >> T-DNA List >> T-DNA Detail Information
 
T-DNA Name  0010A12
Reference (Species)  Magnaporthe oryzae 5 CONTIG
Border (Vector / Readthrough)  LB (Minus) (Y)
Copy Number  Not Exist!
Origin Info (ATMT)  ATMT0010A1
BLAST Search Result (2)  (Not defined) [2006-02-27 16:28:09]
 (Not defined) [2006-09-09 17:22:08]
There are 2 detail information.
     
Insertional Position  Magnaporthe grisea 70-15 supercontig 5.193 : 846636 ~ 846636
Chromosome  7
TTL Info  
Locus Info  None (ORF DIS : 0 bp) (ORF Length : bp)
Near Locus Info  Near : 3' : MGG_02943.5 (2595 bp) (Minus)
 Far   : 5' : MGG_02944.5 (6136 bp) (Minus)
Range of Components
No Type Range Target
1 Border 30 ~ 68 (Plus)   8771 ~ 8812 (Minus)
2 ContigBorder 69 ~ 70 (-)  
3 Contig (193) 71 ~ 219 (Plus)   846634 ~ 846788 (Plus)
4 ContigTDNA 220 ~ 222 (-)  
5 TDNA 223 ~ 244 (Plus)   9063 ~ 9087 (Plus)
Sequences [A]
TAAACCGCCCGCAATACGTCGCATGTGTTTTAAGTTGTCTAATCGTCAATTTGTTTAACCACAATATATCATTTACCTTT
TCTTAAGATCAGATCACGCTACACCACTTGCATGCGAACGCCCATTTTTCTCTTGGCACTACGCAGGGCACACACATACG
CATCAAACTGCCGGAGGCTGTGAAGCAGATCTTGTCTTTATTATGGAGCTAATATGGTG
CTACTCTATTTCTTTGCCCTC
GGAC
TGTCAGGACTGAATCGATCTCAGCCATATCGGAATCGATCTCCGCCATATCGGAATCGATCTCAGCCATATCGGAT
TCGATCTCCGCCATATCGGAATCGATCTCAACCATATCGGAATCGATCCCACCCATATGGGAATCGATCTCAGCCATATT
TTAATGATCTCCCCCATATCGGAATCGATCTCTCCTATTTCGGAATCGGTCCCCCCCAAATCGGAAACGTTTCCTCCAGA
GCGAAATAGATCTCCTCCATATCAAAACCATCTTTTTCATTCTTATAAAAATCACGCCATCGGAAAATATATCATCCATT
TCGAGTCGTTTCGCCCAATTTGATTAATTTCTCCAATTCGAAAAAATCCCCCCCACTCGGAATCAACTTACCCCAACGGA
ATCGAACCCCCCCTATTAAAAAGAATTCTCTATTAAAAAAATTCGTCCCCATTAGGAAACGAACCCCCCTATAAGAAAAC
AACC
Diagram of TDNA
Genome context
Number of overlapped contigs
 
 
     
Insertional Position  Magnaporthe grisea 70-15 supercontig 5.196 : 3543735 ~ 3543735
Chromosome  1
Locus Info  None (ORF DIS : 0 bp) (ORF Length : bp)
Near Locus Info  Near : 3' : MGG_08826.5 (1004 bp) (Plus)
 Far   : 5' : MGG_08825.5 (1076 bp) (Plus)
Range of Components
No Type Range Target
1 Border 30 ~ 70 (Plus)   8771 ~ 8812 (Minus)
2 TDNA 220 ~ 238 (Plus)   9063 ~ 9087 (Plus)
3 ContigTDNA 239 ~ 244 (-)  
4 Contig (196) 245 ~ 261 (Plus)   3543903 ~ 3543925 (Plus)
Sequences [B]
TAAACCGCCCGCAATACGTCGCATGTGTTTTAAGTTGTCTAATCGTCAATTTGTTTAACCACAATATATCATTTACCTTT
TCTTAAGATCAGATCACGCTACACCACTTGCATGCGAACGCCCATTTTTCTCTTGGCACTACGCAGGGCACACACATACG
CATCAAACTGCCGGAGGCTGTGAAGCAGATCTTGTCTTTATTATGGAGCTAATATGGTGCTACTCTATTTCTTTGCCCTC
GGAC
TGTCAGGACTGAATCGATCTCAGCCATATCGGAATCGATCTCCGCCATATCGGAATCGATCTCAGCCATATCGGAT
TCGATCTCCGCCATATCGGAATCGATCTCAACCATATCGGAATCGATCCCACCCATATGGGAATCGATCTCAGCCATATT
TTAATGATCTCCCCCATATCGGAATCGATCTCTCCTATTTCGGAATCGGTCCCCCCCAAATCGGAAACGTTTCCTCCAGA
GCGAAATAGATCTCCTCCATATCAAAACCATCTTTTTCATTCTTATAAAAATCACGCCATCGGAAAATATATCATCCATT
TCGAGTCGTTTCGCCCAATTTGATTAATTTCTCCAATTCGAAAAAATCCCCCCCACTCGGAATCAACTTACCCCAACGGA
ATCGAACCCCCCCTATTAAAAAGAATTCTCTATTAAAAAAATTCGTCCCCATTAGGAAACGAACCCCCCTATAAGAAAAC
AACC
Diagram of TDNA
Genome context
Number of overlapped contigs
 
 
Comment  LB AAD6 3
Create date / Update date  2006-02-27 16:28:02 /
 
Copyright 2007 Fungal Plant Pathology Lab. & FBL
E-mail : yonglee@snu.ac.kr
Magnaporthe oryzae TDNA Database